J3_7Q0F_022
3D structure
- PDB id
- 7Q0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with phyllanthoside
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- UGA*UAAUAG*CAUUA
- Length
- 14 nucleotides
- Bulged bases
- 7Q0F|1|A|U|849
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q0F_022 not in the Motif Atlas
- Homologous match to J3_8C3A_034
- Geometric discrepancy: 0.0759
- The information below is about J3_8C3A_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.2
- Basepair signature
- cWW-tSH-cWW-tHW-cWW-cWW-F
- Number of instances in this motif group
- 7
Unit IDs
7Q0F|1|A|U|631
7Q0F|1|A|G|632
7Q0F|1|A|A|633
*
7Q0F|1|A|U|846
7Q0F|1|A|A|847
7Q0F|1|A|A|848
7Q0F|1|A|U|849
7Q0F|1|A|A|850
7Q0F|1|A|G|851
*
7Q0F|1|A|C|947
7Q0F|1|A|A|948
7Q0F|1|A|U|949
7Q0F|1|A|U|950
7Q0F|1|A|A|951
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain I
- 40S ribosomal protein S7
- Chain M
- Ribosomal 40S subunit protein S11A
- Chain O
- Ribosomal 40S subunit protein S13
- Chain X
- 40S ribosomal protein S22-A
- Chain Y
- Ribosomal 40S subunit protein S23B
- Chain c
- 40S ribosomal protein S27
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