J3_7Q0P_032
3D structure
- PDB id
- 7Q0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with anisomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- CACUG*CGUGCUGG*CGAG
- Length
- 17 nucleotides
- Bulged bases
- 7Q0P|1|A|U|1459, 7Q0P|1|A|G|1526
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q0P_032 not in the Motif Atlas
- Homologous match to J3_8C3A_044
- Geometric discrepancy: 0.0695
- The information below is about J3_8C3A_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_37047.4
- Basepair signature
- cWW-cSS-cSH-F-tWH-F-cWW-cSH-F-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
7Q0P|1|A|C|1456
7Q0P|1|A|A|1457
7Q0P|1|A|C|1458
7Q0P|1|A|U|1459
7Q0P|1|A|G|1460
*
7Q0P|1|A|C|1520
7Q0P|1|A|G|1521
7Q0P|1|A|U|1522
7Q0P|1|A|G|1523
7Q0P|1|A|C|1524
7Q0P|1|A|U|1525
7Q0P|1|A|G|1526
7Q0P|1|A|G|1527
*
7Q0P|1|A|C|1558
7Q0P|1|A|G|1559
7Q0P|1|A|A|1560
7Q0P|1|A|G|1561
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain G
- Ribosomal 40S subunit protein S5
- Chain T
- Ribosomal 40S subunit protein S18B
- Chain U
- Ribosomal 40S subunit protein S19A
- Chain a
- 40S ribosomal protein S25
Coloring options: