J3_7Q0R_004
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- UC*GAGGACUGCG*CUAGGA
- Length
- 18 nucleotides
- Bulged bases
- 7Q0R|1|1|U|605
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Q0R_004 not in the Motif Atlas
- Homologous match to J3_8C3A_050
- Geometric discrepancy: 0.0642
- The information below is about J3_8C3A_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_15033.1
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-F-cWS-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
7Q0R|1|1|U|497
7Q0R|1|1|C|498
*
7Q0R|1|1|G|586
7Q0R|1|1|A|587
7Q0R|1|1|G|588
7Q0R|1|1|G|589
7Q0R|1|1|A|590
7Q0R|1|1|C|591
7Q0R|1|1|U|592
7Q0R|1|1|G|593
7Q0R|1|1|C|594
7Q0R|1|1|G|595
*
7Q0R|1|1|C|604
7Q0R|1|1|U|605
7Q0R|1|1|A|606
7Q0R|1|1|G|607
7Q0R|1|1|G|608
7Q0R|1|1|A|609
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AF
- Ribosomal 60S subunit protein L32
- Chain l
- Ribosomal 60S subunit protein L4B
- Chain n
- 60S ribosomal protein L6
- Chain o
- Ribosomal 60S subunit protein L7A
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