J3_7QGN_028
3D structure
- PDB id
- 7QGN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the SmrB-bound E. coli disome - stalled 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.37 Å
Loop
- Sequence
- GCCUAAC*GGGGAAUAU*AGC
- Length
- 19 nucleotides
- Bulged bases
- 7QGN|1|0|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QGN_028 not in the Motif Atlas
- Homologous match to J3_5J7L_050
- Geometric discrepancy: 0.0716
- The information below is about J3_5J7L_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46317.4
- Basepair signature
- cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7QGN|1|0|G|46
7QGN|1|0|C|47
7QGN|1|0|C|48
7QGN|1|0|U|49
7QGN|1|0|A|50
7QGN|1|0|A|51
7QGN|1|0|C|52
*
7QGN|1|0|G|359
7QGN|1|0|G|360
7QGN|1|0|G|361
7QGN|1|0|G|362
7QGN|1|0|A|363
7QGN|1|0|A|364
7QGN|1|0|U|365
7QGN|1|0|A|366
7QGN|1|0|U|367
*
7QGN|1|0|A|393
7QGN|1|0|G|394
7QGN|1|0|C|395
Current chains
- Chain 0
- 16S rRNA
Nearby chains
- Chain E
- 30S ribosomal protein S12
- Chain I
- 30S ribosomal protein S16
Coloring options: