J3_7QGR_007
3D structure
- PDB id
- 7QGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the SmrB-bound E. coli disome - collided 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 7QGR|1|0|A|975, 7QGR|1|0|G|976, 7QGR|1|0|A|978
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QGR_007 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.064
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7QGR|1|0|U|955
7QGR|1|0|U|956
7QGR|1|0|U|957
7QGR|1|0|A|958
7QGR|1|0|A|959
7QGR|1|0|U|960
7QGR|1|0|U|961
7QGR|1|0|C|962
*
7QGR|1|0|G|973
7QGR|1|0|A|974
7QGR|1|0|A|975
7QGR|1|0|G|976
7QGR|1|0|A|977
7QGR|1|0|A|978
7QGR|1|0|C|979
7QGR|1|0|C|980
7QGR|1|0|U|981
7QGR|1|0|U|982
7QGR|1|0|A|983
7QGR|1|0|C|984
*
7QGR|1|0|G|1221
7QGR|1|0|G|1222
7QGR|1|0|C|1223
7QGR|1|0|U|1224
7QGR|1|0|A|1225
Current chains
- Chain 0
- 16S rRNA
Nearby chains
- Chain 9
- 30S ribosomal protein S10
- Chain D
- 30S ribosomal protein S13
- Chain E
- 30S ribosomal protein S14
- Chain J
- 30S ribosomal protein S19
- Chain u
- Transfer RNA; tRNA
Coloring options: