J3_7QGU_006

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GGA*UUUAAAG*CAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGU_006 not in the Motif Atlas

Homologous match to J3_5J7L_040

Geometric discrepancy: 0.3017

The information below is about J3_5J7L_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28621.5

Basepair signature

cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F

Number of instances in this motif group

7

Unit IDs

7QGU|1|A|G|1101
7QGU|1|A|G|1102
7QGU|1|A|A|1103
*
7QGU|1|A|U|1127
7QGU|1|A|U|1128
7QGU|1|A|U|1129
7QGU|1|A|A|1130
7QGU|1|A|A|1131
7QGU|1|A|A|1132
7QGU|1|A|G|1133
*
7QGU|1|A|C|1148
7QGU|1|A|A|1149
7QGU|1|A|C|1150

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L10

Chain I

50S ribosomal protein L11

Chain f

50S ribosomal protein L36