J3_7QGU_008

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CUAAG*CGCAAAC*GUAG

Length

16 nucleotides

Bulged bases

7QGU|1|A|A|1654

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGU_008 not in the Motif Atlas

Homologous match to J3_4WF9_005

Geometric discrepancy: 0.3323

The information below is about J3_4WF9_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68164.1

Basepair signature

cWW-tSH-F-F-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

1

Unit IDs

7QGU|1|A|C|1344
7QGU|1|A|U|1345
7QGU|1|A|A|1346
7QGU|1|A|A|1347
7QGU|1|A|G|1348
*
7QGU|1|A|C|1650
7QGU|1|A|G|1651
7QGU|1|A|C|1652
7QGU|1|A|A|1653
7QGU|1|A|A|1654
7QGU|1|A|A|1655
7QGU|1|A|C|1656
*
7QGU|1|A|G|1665
7QGU|1|A|U|1666
7QGU|1|A|A|1667
7QGU|1|A|G|1668

Current chains

Chain A

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L34