J3_7QGU_024

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

UG*UGUUG*CGCAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGU_024 not in the Motif Atlas

Homologous match to J3_5J7L_009

Geometric discrepancy: 0.1374

The information below is about J3_5J7L_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76043.3

Basepair signature

cWW-cWW-tSS-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

7QGU|1|W|U|1083
7QGU|1|W|G|1084
*
7QGU|1|W|U|1093
7QGU|1|W|G|1094
7QGU|1|W|U|1095
7QGU|1|W|U|1096
7QGU|1|W|G|1097
*
7QGU|1|W|C|1108
7QGU|1|W|G|1109
7QGU|1|W|C|1110
7QGU|1|W|A|1111
7QGU|1|W|A|1112

Current chains

Chain W

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S2

Chain j

30S ribosomal protein S5