J3_7QGU_030

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

UCGGGAC*GACAA*UA

Length

14 nucleotides

Bulged bases

7QGU|1|A|A|1423

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGU_030 not in the Motif Atlas

Homologous match to J3_4WF9_016

Geometric discrepancy: 0.1641

The information below is about J3_4WF9_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_94309.1

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW-F

Number of instances in this motif group

9

Unit IDs

7QGU|1|A|U|1383
7QGU|1|A|C|1384
7QGU|1|A|G|1385
7QGU|1|A|G|1386
7QGU|1|A|G|1387
7QGU|1|A|A|1388
7QGU|1|A|C|1389
*
7QGU|1|A|G|1420
7QGU|1|A|A|1421
7QGU|1|A|C|1422
7QGU|1|A|A|1423
7QGU|1|A|A|1424
*
7QGU|1|A|U|1441
7QGU|1|A|A|1442

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23

Chain d

50S ribosomal protein L34