J3_7QGU_033

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CAU*AGUAAG*CGAGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QGU_033 not in the Motif Atlas

Homologous match to J3_4WF9_020

Geometric discrepancy: 0.2068

The information below is about J3_4WF9_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_24127.1

Basepair signature

cWW-F-cWW-tWH-F-F-tHS-cWW

Number of instances in this motif group

2

Unit IDs

7QGU|1|A|C|2818
7QGU|1|A|A|2819
7QGU|1|A|U|2820
*
7QGU|1|A|A|2831
7QGU|1|A|G|2832
7QGU|1|A|U|2833
7QGU|1|A|A|2834
7QGU|1|A|A|2835
7QGU|1|A|G|2836
*
7QGU|1|A|C|2914
7QGU|1|A|G|2915
7QGU|1|A|A|2916
7QGU|1|A|G|2917
7QGU|1|A|G|2918

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain S

50S ribosomal protein L22