J3_7QP7_004
3D structure
- PDB id
- 7QP7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in closed state (h48S AUG closed)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUUC*GGACCAGAG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 7QP7|1|A|G|991
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QP7_004 not in the Motif Atlas
- Homologous match to J3_8P9A_074
- Geometric discrepancy: 0.1104
- The information below is about J3_8P9A_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_23895.1
- Basepair signature
- cWW-cWW-cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7QP7|1|A|A|938
7QP7|1|A|U|939
7QP7|1|A|U|940
7QP7|1|A|C|941
*
7QP7|1|A|G|985
7QP7|1|A|G|986
7QP7|1|A|A|987
7QP7|1|A|C|988
7QP7|1|A|C|989
7QP7|1|A|A|990
7QP7|1|A|G|991
7QP7|1|A|A|992
7QP7|1|A|G|993
*
7QP7|1|A|C|1000
7QP7|1|A|A|1001
7QP7|1|A|U|1002
7QP7|1|A|U|1003
7QP7|1|A|U|1004
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain I
- 40S ribosomal protein S13
- Chain O
- 40S ribosomal protein S3a
- Chain P
- 40S ribosomal protein S14
- Chain Q
- 40S ribosomal protein S26
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