J3_7QV1_028
3D structure
- PDB id
- 7QV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis collided disome (Leading 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUG*CGAUAGUGAACCAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 7QV1|1|V|U|34, 7QV1|1|V|U|495, 7QV1|1|V|C|503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QV1_028 not in the Motif Atlas
- Homologous match to J3_9DFE_003
- Geometric discrepancy: 0.1285
- The information below is about J3_9DFE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07616.1
- Basepair signature
- cWW-cSS-tSS-tSW-tHW-cWW-tWH-F-F-tHH-tSS-tWH-F-tHS-cWW-F-cSH
- Number of instances in this motif group
- 10
Unit IDs
7QV1|1|V|C|32
7QV1|1|V|U|33
7QV1|1|V|U|34
7QV1|1|V|G|35
*
7QV1|1|V|C|492
7QV1|1|V|G|493
7QV1|1|V|A|494
7QV1|1|V|U|495
7QV1|1|V|A|496
7QV1|1|V|G|497
7QV1|1|V|U|498
7QV1|1|V|G|499
7QV1|1|V|A|500
7QV1|1|V|A|501
7QV1|1|V|C|502
7QV1|1|V|C|503
7QV1|1|V|A|504
7QV1|1|V|G|505
7QV1|1|V|U|506
7QV1|1|V|A|507
7QV1|1|V|C|508
*
7QV1|1|V|G|515
7QV1|1|V|G|516
7QV1|1|V|A|517
7QV1|1|V|A|518
7QV1|1|V|A|519
7QV1|1|V|G|520
Current chains
- Chain V
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain E
- 50S ribosomal protein L4
- Chain I
- Nascent chain
- Chain Q
- 50S ribosomal protein L20
- Chain T
- 50S ribosomal protein L23
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