J3_7QV3_009

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CUAAG*CGCAAAC*GUAG

Length

16 nucleotides

Bulged bases

7QV3|1|V|A|1654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV3_009 not in the Motif Atlas

Homologous match to J3_4WF9_005

Geometric discrepancy: 0.1439

The information below is about J3_4WF9_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68164.1

Basepair signature

cWW-tSH-F-F-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

1

Unit IDs

7QV3|1|V|C|1344
7QV3|1|V|U|1345
7QV3|1|V|A|1346
7QV3|1|V|A|1347
7QV3|1|V|G|1348
*
7QV3|1|V|C|1650
7QV3|1|V|G|1651
7QV3|1|V|C|1652
7QV3|1|V|A|1653
7QV3|1|V|A|1654
7QV3|1|V|A|1655
7QV3|1|V|C|1656
*
7QV3|1|V|G|1665
7QV3|1|V|U|1666
7QV3|1|V|A|1667
7QV3|1|V|G|1668

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34