3D structure

PDB id
7QV3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)
Experimental method
ELECTRON MICROSCOPY
Resolution
5.14 Å

Loop

Sequence
CGUCAG*CGCAACC*GAUGACG
Length
20 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7QV3_024 not in the Motif Atlas
Homologous match to J3_4LFB_007
Geometric discrepancy: 0.1765
The information below is about J3_4LFB_007
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_01343.1
Basepair signature
cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
Number of instances in this motif group
2

Unit IDs

7QV3|1|a|C|1073
7QV3|1|a|G|1074
7QV3|1|a|U|1075
7QV3|1|a|C|1076
7QV3|1|a|A|1077
7QV3|1|a|G|1078
*
7QV3|1|a|C|1117
7QV3|1|a|G|1118
7QV3|1|a|C|1119
7QV3|1|a|A|1120
7QV3|1|a|A|1121
7QV3|1|a|C|1122
7QV3|1|a|C|1123
*
7QV3|1|a|G|1196
7QV3|1|a|A|1197
7QV3|1|a|U|1198
7QV3|1|a|G|1199
7QV3|1|a|A|1200
7QV3|1|a|C|1201
7QV3|1|a|G|1202

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain c
30S ribosomal protein S3
Chain e
30S ribosomal protein S5
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14

Coloring options:


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