J3_7QV3_033

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GCCUAAU*AGGGAAUCU*AGC

Length

19 nucleotides

Bulged bases

7QV3|1|a|C|50, 7QV3|1|a|A|53

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7QV3_033 not in the Motif Atlas

Homologous match to J3_4LFB_014

Geometric discrepancy: 0.1241

The information below is about J3_4LFB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_63856.1

Basepair signature

cWW-cWW-cSW-F-cWW-F-tHH-F-cWW-F-F-F-F

Number of instances in this motif group

5

Unit IDs

7QV3|1|a|G|48
7QV3|1|a|C|49
7QV3|1|a|C|50
7QV3|1|a|U|51
7QV3|1|a|A|52
7QV3|1|a|A|53
7QV3|1|a|U|54
*
7QV3|1|a|A|367
7QV3|1|a|G|368
7QV3|1|a|G|369
7QV3|1|a|G|370
7QV3|1|a|A|371
7QV3|1|a|A|372
7QV3|1|a|U|373
7QV3|1|a|C|374
7QV3|1|a|U|375
*
7QV3|1|a|A|401
7QV3|1|a|G|402
7QV3|1|a|C|403

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16