J3_7QWR_026
3D structure
- PDB id
- 7QWR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUC*GCCUCACGAUCC*GGUGUC
- Length
- 21 nucleotides
- Bulged bases
- 7QWR|1|5|U|4374
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QWR_026 not in the Motif Atlas
- Geometric match to J3_9AXU_021
- Geometric discrepancy: 0.1514
- The information below is about J3_9AXU_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04772.4
- Basepair signature
- cWW-F-tHH-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7QWR|1|5|G|4228
7QWR|1|5|U|4229
7QWR|1|5|C|4230
*
7QWR|1|5|G|4331
7QWR|1|5|C|4332
7QWR|1|5|C|4333
7QWR|1|5|U|4334
7QWR|1|5|C|4335
7QWR|1|5|A|4336
7QWR|1|5|C|4337
7QWR|1|5|G|4338
7QWR|1|5|A|4339
7QWR|1|5|U|4340
7QWR|1|5|C|4341
7QWR|1|5|C|4342
*
7QWR|1|5|G|4370
7QWR|1|5|G|4371
7QWR|1|5|U|4372
7QWR|1|5|G|4373
7QWR|1|5|U|4374
7QWR|1|5|C|4375
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain Q
- eL18
- Chain T
- 60S ribosomal protein L21
- Chain a
- 60S ribosomal protein L27a
- Chain o
- eL42
Coloring options: