J3_7QWS_014
3D structure
- PDB id
- 7QWS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUC*GAG*CAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 7QWS|1|5|A|4280
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7QWS_014 not in the Motif Atlas
- Geometric match to J3_7A0S_010
- Geometric discrepancy: 0.3566
- The information below is about J3_7A0S_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_05327.1
- Basepair signature
- cWW-tWH-tWW-cWW-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
7QWS|1|5|C|4241
7QWS|1|5|U|4242
7QWS|1|5|C|4243
*
7QWS|1|5|G|4267
7QWS|1|5|A|4268
7QWS|1|5|G|4269
*
7QWS|1|5|C|4278
7QWS|1|5|A|4279
7QWS|1|5|A|4280
7QWS|1|5|A|4281
7QWS|1|5|A|4282
7QWS|1|5|G|4283
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain D
- Ribosomal_L18_c domain-containing protein
- Chain J
- Ribosomal protein L11
- Chain T
- 60S ribosomal protein L21
- Chain o
- eL42
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