J3_7RYF_030
3D structure
- PDB id
- 7RYF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- AGGACG*CC*GAAAAGU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7RYF_030 not in the Motif Atlas
- Homologous match to J3_5J7L_069
- Geometric discrepancy: 0.1105
- The information below is about J3_5J7L_069
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34864.2
- Basepair signature
- cWW-F-cWW-F-tHH-F-tHS-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7RYF|1|A|A|1419
7RYF|1|A|G|1420
7RYF|1|A|G|1421
7RYF|1|A|A|1422
7RYF|1|A|C|1423
7RYF|1|A|G|1424
*
7RYF|1|A|C|1562
7RYF|1|A|C|1563
*
7RYF|1|A|G|1566
7RYF|1|A|A|1567
7RYF|1|A|A|1568
7RYF|1|A|A|1569
7RYF|1|A|A|1570
7RYF|1|A|G|1571
7RYF|1|A|U|1572
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
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