J3_7RYH_026
3D structure
- PDB id
- 7RYH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-TP-6076 complex: Empty 70S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.43 Å
Loop
- Sequence
- GC*GCGAAAAGAAC*GAGUGAAAUAGAUCC
- Length
- 28 nucleotides
- Bulged bases
- 7RYH|1|A|U|503, 7RYH|1|A|U|507
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7RYH_026 not in the Motif Atlas
- Homologous match to J3_4WF9_011
- Geometric discrepancy: 0.2539
- The information below is about J3_4WF9_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_92134.2
- Basepair signature
- cWW-cWW-cWW-F-tWH-cSS-tSS-tSH-tSH-tWW-tHH-tWH-tWW-F-F-cSS-cSW-F-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7RYH|1|A|G|37
7RYH|1|A|C|38
*
7RYH|1|A|G|473
7RYH|1|A|C|474
7RYH|1|A|G|475
7RYH|1|A|A|476
7RYH|1|A|A|477
7RYH|1|A|A|478
7RYH|1|A|A|479
7RYH|1|A|G|480
7RYH|1|A|A|481
7RYH|1|A|A|482
7RYH|1|A|C|483
*
7RYH|1|A|G|495
7RYH|1|A|A|496
7RYH|1|A|G|497
7RYH|1|A|U|498
7RYH|1|A|G|499
7RYH|1|A|A|500
7RYH|1|A|A|501
7RYH|1|A|A|502
7RYH|1|A|U|503
7RYH|1|A|A|504
7RYH|1|A|G|505
7RYH|1|A|A|506
7RYH|1|A|U|507
7RYH|1|A|C|508
7RYH|1|A|C|509
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain P
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L22
- Chain S
- 50S ribosomal protein L23
- Chain T
- 50S ribosomal protein L24
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