J3_7S0S_013
3D structure
- PDB id
- 7S0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- CUC*GAG*CACAAG
- Length
- 12 nucleotides
- Bulged bases
- 7S0S|1|C|C|2558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7S0S_013 not in the Motif Atlas
- Homologous match to J3_4WF9_008
- Geometric discrepancy: 0.1513
- The information below is about J3_4WF9_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_05327.1
- Basepair signature
- cWW-tWH-tWW-cWW-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
7S0S|1|C|C|2519
7S0S|1|C|U|2520
7S0S|1|C|C|2521
*
7S0S|1|C|G|2545
7S0S|1|C|A|2546
7S0S|1|C|G|2547
*
7S0S|1|C|C|2556
7S0S|1|C|A|2557
7S0S|1|C|C|2558
7S0S|1|C|A|2559
7S0S|1|C|A|2560
7S0S|1|C|G|2561
Current chains
- Chain C
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L5
- Chain Q
- 50S ribosomal protein L18
- Chain Y
- 50S ribosomal protein L27
- Chain i
- 5S ribosomal RNA; 5S rRNA
Coloring options: