J3_7SAE_010

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CC*GUUGAU*AAUCG

Length

13 nucleotides

Bulged bases

7SAE|1|A|U|2858, 7SAE|1|A|A|2860

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7SAE_010 not in the Motif Atlas

Homologous match to J3_7A0S_013

Geometric discrepancy: 0.1895

The information below is about J3_7A0S_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76911.2

Basepair signature

cWW-tHS-F-F-F-cWW-cWW

Number of instances in this motif group

4

Unit IDs

7SAE|1|A|C|2839
7SAE|1|A|C|2840
*
7SAE|1|A|G|2856
7SAE|1|A|U|2857
7SAE|1|A|U|2858
7SAE|1|A|G|2859
7SAE|1|A|A|2860
7SAE|1|A|U|2861
*
7SAE|1|A|A|2907
7SAE|1|A|A|2908
7SAE|1|A|U|2909
7SAE|1|A|C|2910
7SAE|1|A|G|2911

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17

Chain b

50S ribosomal protein L32