J3_7SAE_014

3D structure

PDB id

7SAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

44SR70P Class1 ribosomal particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UCGGGAC*GACAA*UA

Length

14 nucleotides

Bulged bases

7SAE|1|A|A|1423

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7SAE_014 not in the Motif Atlas

Homologous match to J3_4WF9_016

Geometric discrepancy: 0.1763

The information below is about J3_4WF9_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_94309.1

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW-F

Number of instances in this motif group

9

Unit IDs

7SAE|1|A|U|1383
7SAE|1|A|C|1384
7SAE|1|A|G|1385
7SAE|1|A|G|1386
7SAE|1|A|G|1387
7SAE|1|A|A|1388
7SAE|1|A|C|1389
*
7SAE|1|A|G|1420
7SAE|1|A|A|1421
7SAE|1|A|C|1422
7SAE|1|A|A|1423
7SAE|1|A|A|1424
*
7SAE|1|A|U|1441
7SAE|1|A|A|1442

Current chains

Chain A

RNA (2434-MER)

Nearby chains

Chain T

50S ribosomal protein L23