J3_7SFR_034
3D structure
- PDB id
- 7SFR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmethylated Mtb Ribosome 50S with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGG*CUAGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- 7SFR|1|a|A|644
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SFR_034 not in the Motif Atlas
- Homologous match to J3_5J7L_051
- Geometric discrepancy: 0.1316
- The information below is about J3_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.4
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7SFR|1|a|U|577
7SFR|1|a|G|578
7SFR|1|a|G|579
*
7SFR|1|a|C|642
7SFR|1|a|U|643
7SFR|1|a|A|644
7SFR|1|a|G|645
7SFR|1|a|A|646
*
7SFR|1|a|U|742
7SFR|1|a|G|743
7SFR|1|a|A|744
7SFR|1|a|C|745
7SFR|1|a|G|746
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain h
- 30S ribosomal protein S8
- Chain l
- 30S ribosomal protein S12
- Chain o
- 30S ribosomal protein S15
- Chain q
- 30S ribosomal protein S17
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