J3_7SSW_007
3D structure
- PDB id
- 7SSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late translocation intermediate with EF-G dissociated (Structure VI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CAAG*CCCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 7SSW|1|1|C|1607, 7SSW|1|1|A|1609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7SSW_007 not in the Motif Atlas
- Homologous match to J3_7A0S_007
- Geometric discrepancy: 0.2332
- The information below is about J3_7A0S_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47341.1
- Basepair signature
- cWW-tHH-F-tHW-tHS-tWW-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7SSW|1|1|C|1306
7SSW|1|1|A|1307
7SSW|1|1|A|1308
7SSW|1|1|G|1309
*
7SSW|1|1|C|1605
7SSW|1|1|C|1606
7SSW|1|1|C|1607
7SSW|1|1|A|1608
7SSW|1|1|A|1609
7SSW|1|1|A|1610
7SSW|1|1|C|1611
*
7SSW|1|1|G|1620
7SSW|1|1|U|1621
7SSW|1|1|G|1622
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L34
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