J3_7TOS_024
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAUC*GUA*UUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7TOS|1|23S|A|2518, 7TOS|1|23S|U|2519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7TOS_024 not in the Motif Atlas
- Homologous match to J3_8VTW_008
- Geometric discrepancy: 0.2073
- The information below is about J3_8VTW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.4
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7TOS|1|23S|C|2517
7TOS|1|23S|A|2518
7TOS|1|23S|U|2519
7TOS|1|23S|C|2520
*
7TOS|1|23S|G|2545
7TOS|1|23S|U|2546
7TOS|1|23S|A|2547
*
7TOS|1|23S|U|2561
7TOS|1|23S|U|2562
7TOS|1|23S|U|2563
7TOS|1|23S|A|2564
7TOS|1|23S|A|2565
7TOS|1|23S|A|2566
7TOS|1|23S|G|2567
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L03
- 50S ribosomal protein L3
- Chain L14
- 50S ribosomal protein L14
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