J3_7TTW_005

3D structure

PDB id

7TTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistance

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7TTW_005 not in the Motif Atlas

Homologous match to J3_8VTW_002

Geometric discrepancy: 0.1464

The information below is about J3_8VTW_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_44724.5

Basepair signature

cWW-tSH-F-cWW-tHS-cWW-F

Number of instances in this motif group

6

Unit IDs

7TTW|1|1|C|743
7TTW|1|1|A|744
7TTW|1|1|G|745
*
7TTW|1|1|C|777
7TTW|1|1|G|778
7TTW|1|1|A|779
7TTW|1|1|A|780
7TTW|1|1|C|781
*
7TTW|1|1|G|805
7TTW|1|1|A|806
7TTW|1|1|U|807
7TTW|1|1|G|808

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2