J3_7TTW_017

3D structure

PDB id

7TTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistance

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7TTW_017 not in the Motif Atlas

Homologous match to J3_7A0S_019

Geometric discrepancy: 0.1243

The information below is about J3_7A0S_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.3

Basepair signature

cWW-tSH-tSH-tHH-F-F-cWW-F-cWW

Number of instances in this motif group

4

Unit IDs

7TTW|1|1|G|1468
7TTW|1|1|G|1469
7TTW|1|1|G|1470
7TTW|1|1|A|1471
7TTW|1|1|C|1472
7TTW|1|1|G|1473
*
7TTW|1|1|C|1611
7TTW|1|1|C|1612
*
7TTW|1|1|G|1615
7TTW|1|1|A|1616
7TTW|1|1|A|1617
7TTW|1|1|A|1618
7TTW|1|1|A|1619
7TTW|1|1|G|1620
7TTW|1|1|C|1621

Current chains

Chain 1

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L2