J3_7UG7_004

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

7UG7|1|16|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UG7_004 not in the Motif Atlas

Homologous match to J3_5J7L_004

Geometric discrepancy: 0.0798

The information below is about J3_5J7L_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

7UG7|1|16|C|826
7UG7|1|16|U|827
7UG7|1|16|U|828
7UG7|1|16|G|829
*
7UG7|1|16|C|857
7UG7|1|16|G|858
7UG7|1|16|G|859
7UG7|1|16|A|860
7UG7|1|16|G|861
*
7UG7|1|16|C|868
7UG7|1|16|G|869
7UG7|1|16|U|870
7UG7|1|16|U|871
7UG7|1|16|A|872
7UG7|1|16|A|873
7UG7|1|16|G|874

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SB

30S ribosomal protein S2

Chain SH

30S ribosomal protein S8

Chain SU

30S ribosomal protein S21