3D structure

PDB id
7UG7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
Experimental method
ELECTRON MICROSCOPY
Resolution
2.58 Å

Loop

Sequence
GCCUAAC*GGGGAAUAU*AGC
Length
19 nucleotides
Bulged bases
7UG7|1|16|C|48, 7UG7|1|16|A|51
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7UG7_028 not in the Motif Atlas
Homologous match to J3_5J7L_050
Geometric discrepancy: 0.0784
The information below is about J3_5J7L_050
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_46317.4
Basepair signature
cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F
Number of instances in this motif group
4

Unit IDs

7UG7|1|16|G|46
7UG7|1|16|C|47
7UG7|1|16|C|48
7UG7|1|16|U|49
7UG7|1|16|A|50
7UG7|1|16|A|51
7UG7|1|16|C|52
*
7UG7|1|16|G|359
7UG7|1|16|G|360
7UG7|1|16|G|361
7UG7|1|16|G|362
7UG7|1|16|A|363
7UG7|1|16|A|364
7UG7|1|16|U|365
7UG7|1|16|A|366
7UG7|1|16|U|367
*
7UG7|1|16|A|393
7UG7|1|16|G|394
7UG7|1|16|C|395

Current chains

Chain 16
16S rRNA

Nearby chains

Chain EF
Elongation factor G
Chain SL
30S ribosomal protein S12
Chain SP
30S ribosomal protein S16

Coloring options:


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