J3_7UG7_036

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UG7_036 not in the Motif Atlas

Homologous match to J3_5J7L_069

Geometric discrepancy: 0.0581

The information below is about J3_5J7L_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.2

Basepair signature

cWW-F-cWW-F-tHH-F-tHS-tHS-cWW

Number of instances in this motif group

4

Unit IDs

7UG7|1|23|G|1424
7UG7|1|23|G|1425
7UG7|1|23|G|1426
7UG7|1|23|A|1427
7UG7|1|23|C|1428
7UG7|1|23|G|1429
*
7UG7|1|23|C|1564
7UG7|1|23|C|1565
*
7UG7|1|23|G|1568
7UG7|1|23|A|1569
7UG7|1|23|A|1570
7UG7|1|23|A|1571
7UG7|1|23|A|1572
7UG7|1|23|G|1573
7UG7|1|23|C|1574

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LB

50S ribosomal protein L2