J3_7UNR_012
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GUUGAU*AAUUG
- Length
- 13 nucleotides
- Bulged bases
- 7UNR|1|A|U|2820, 7UNR|1|A|A|2822
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNR_012 not in the Motif Atlas
- Homologous match to J3_4WF9_021
- Geometric discrepancy: 0.418
- The information below is about J3_4WF9_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UNR|1|A|C|2801
7UNR|1|A|C|2802
*
7UNR|1|A|G|2818
7UNR|1|A|U|2819
7UNR|1|A|U|2820
7UNR|1|A|G|2821
7UNR|1|A|A|2822
7UNR|1|A|U|2823
*
7UNR|1|A|A|2869
7UNR|1|A|A|2870
7UNR|1|A|U|2871
7UNR|1|A|U|2872
7UNR|1|A|G|2873
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain P
- 50S ribosomal protein L17
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