3D structure

PDB id
7UNR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CUAG*CGCAG*CGAUAAG
Length
16 nucleotides
Bulged bases
7UNR|1|a|U|865
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7UNR_017 not in the Motif Atlas
Homologous match to J3_5J7L_004
Geometric discrepancy: 0.1471
The information below is about J3_5J7L_004
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_85054.4
Basepair signature
cWW-tWW-tHS-F-cWW-tHS-cWW-F
Number of instances in this motif group
3

Unit IDs

7UNR|1|a|C|820
7UNR|1|a|U|821
7UNR|1|a|A|822
7UNR|1|a|G|823
*
7UNR|1|a|C|851
7UNR|1|a|G|852
7UNR|1|a|C|853
7UNR|1|a|A|854
7UNR|1|a|G|855
*
7UNR|1|a|C|862
7UNR|1|a|G|863
7UNR|1|a|A|864
7UNR|1|a|U|865
7UNR|1|a|A|866
7UNR|1|a|A|867
7UNR|1|a|G|868

Current chains

Chain a
16S Ribosomal RNA

Nearby chains

Chain b
30S ribosomal protein S2
Chain e
30S ribosomal protein S5
Chain h
30S ribosomal protein S8
Chain u
30S ribosomal protein S21

Coloring options:


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