J3_7UNR_027
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GC*GCGAAAAGAAC*GAGUGAAAUAGAACC
- Length
- 28 nucleotides
- Bulged bases
- 7UNR|1|A|U|495, 7UNR|1|A|A|499
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNR_027 not in the Motif Atlas
- Homologous match to J3_4WF9_011
- Geometric discrepancy: 0.1376
- The information below is about J3_4WF9_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_92134.2
- Basepair signature
- cWW-cWW-cWW-F-tWH-cSS-tSS-tSH-tSH-tWW-tHH-tWH-tWW-F-F-cSS-cSW-F-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7UNR|1|A|G|30
7UNR|1|A|C|31
*
7UNR|1|A|G|465
7UNR|1|A|C|466
7UNR|1|A|G|467
7UNR|1|A|A|468
7UNR|1|A|A|469
7UNR|1|A|A|470
7UNR|1|A|A|471
7UNR|1|A|G|472
7UNR|1|A|A|473
7UNR|1|A|A|474
7UNR|1|A|C|475
*
7UNR|1|A|G|487
7UNR|1|A|A|488
7UNR|1|A|G|489
7UNR|1|A|U|490
7UNR|1|A|G|491
7UNR|1|A|A|492
7UNR|1|A|A|493
7UNR|1|A|A|494
7UNR|1|A|U|495
7UNR|1|A|A|496
7UNR|1|A|G|497
7UNR|1|A|A|498
7UNR|1|A|A|499
7UNR|1|A|C|500
7UNR|1|A|C|501
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain S
- 50S ribosomal protein L20
- Chain U
- 50S ribosomal protein L22
- Chain W
- 50S ribosomal protein L24
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