J3_7UNU_009
3D structure
- PDB id
- 7UNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUC*GAG*CAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 7UNU|1|A|A|2321, 7UNU|1|A|A|2323
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNU_009 not in the Motif Atlas
- Homologous match to J3_8VTW_007
- Geometric discrepancy: 0.4393
- The information below is about J3_8VTW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7UNU|1|A|C|2282
7UNU|1|A|U|2283
7UNU|1|A|C|2284
*
7UNU|1|A|G|2308
7UNU|1|A|A|2309
7UNU|1|A|G|2310
*
7UNU|1|A|C|2319
7UNU|1|A|A|2320
7UNU|1|A|A|2321
7UNU|1|A|A|2322
7UNU|1|A|A|2323
7UNU|1|A|G|2324
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S ribosomal protein L5
- Chain Q
- 50S ribosomal protein L18
- Chain Y
- 50S ribosomal protein L27
- Chain v
- Transfer RNA; tRNA
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