J3_7UNU_016
3D structure
- PDB id
- 7UNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UG*CACCAGUGG*CGA
- Length
- 14 nucleotides
- Bulged bases
- 7UNU|1|a|U|717
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNU_016 not in the Motif Atlas
- Homologous match to J3_5J7L_003
- Geometric discrepancy: 0.1242
- The information below is about J3_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.4
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7UNU|1|a|U|666
7UNU|1|a|G|667
*
7UNU|1|a|C|711
7UNU|1|a|A|712
7UNU|1|a|C|713
7UNU|1|a|C|714
7UNU|1|a|A|715
7UNU|1|a|G|716
7UNU|1|a|U|717
7UNU|1|a|G|718
7UNU|1|a|G|719
*
7UNU|1|a|C|726
7UNU|1|a|G|727
7UNU|1|a|A|728
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain f
- 30S ribosomal protein S6
- Chain k
- 30S ribosomal protein S11
- Chain o
- 30S ribosomal protein S15
- Chain r
- 30S ribosomal protein S18
- Chain u
- 30S ribosomal protein S21
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