J3_7UNU_019
3D structure
- PDB id
- 7UNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 7UNU|1|a|A|969, 7UNU|1|a|G|970
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNU_019 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.0857
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7UNU|1|a|U|949
7UNU|1|a|U|950
7UNU|1|a|U|951
7UNU|1|a|A|952
7UNU|1|a|A|953
7UNU|1|a|U|954
7UNU|1|a|U|955
7UNU|1|a|C|956
*
7UNU|1|a|G|967
7UNU|1|a|A|968
7UNU|1|a|A|969
7UNU|1|a|G|970
7UNU|1|a|A|971
7UNU|1|a|A|972
7UNU|1|a|C|973
7UNU|1|a|C|974
7UNU|1|a|U|975
7UNU|1|a|U|976
7UNU|1|a|A|977
7UNU|1|a|C|978
*
7UNU|1|a|G|1215
7UNU|1|a|G|1216
7UNU|1|a|C|1217
7UNU|1|a|U|1218
7UNU|1|a|A|1219
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
- Chain n
- 30S ribosomal protein S14
- Chain s
- 30S ribosomal protein S19
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