J3_7UNU_025
3D structure
- PDB id
- 7UNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAUG*CGUAGUCC*GUCG
- Length
- 17 nucleotides
- Bulged bases
- 7UNU|1|a|U|1234
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNU_025 not in the Motif Atlas
- Homologous match to J3_4LFB_009
- Geometric discrepancy: 0.138
- The information below is about J3_4LFB_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_03192.1
- Basepair signature
- cWW-cSS-tHW-F-F-F-cWW-cWW-cSH-cSH-F
- Number of instances in this motif group
- 5
Unit IDs
7UNU|1|a|C|1231
7UNU|1|a|A|1232
7UNU|1|a|A|1233
7UNU|1|a|U|1234
7UNU|1|a|G|1235
*
7UNU|1|a|C|1290
7UNU|1|a|G|1291
7UNU|1|a|U|1292
7UNU|1|a|A|1293
7UNU|1|a|G|1294
7UNU|1|a|U|1295
7UNU|1|a|C|1296
7UNU|1|a|C|1297
*
7UNU|1|a|G|1328
7UNU|1|a|U|1329
7UNU|1|a|C|1330
7UNU|1|a|G|1331
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain m
- 30S ribosomal protein S13
Coloring options: