J3_7UNV_027
3D structure
- PDB id
- 7UNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUUG*CGAUAGUGAACCAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 7UNV|1|A|U|439, 7UNV|1|A|C|447
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNV_027 not in the Motif Atlas
- Homologous match to J3_9DFE_003
- Geometric discrepancy: 0.1077
- The information below is about J3_9DFE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_30040.2
- Basepair signature
- cWW-tWH-F-cWW-tSS-tHH-cSS-tWH-tSW-tHS-cWW-tWH-F-cSH-tSS-F-F
- Number of instances in this motif group
- 7
Unit IDs
7UNV|1|A|C|32
7UNV|1|A|U|33
7UNV|1|A|U|34
7UNV|1|A|G|35
*
7UNV|1|A|C|436
7UNV|1|A|G|437
7UNV|1|A|A|438
7UNV|1|A|U|439
7UNV|1|A|A|440
7UNV|1|A|G|441
7UNV|1|A|U|442
7UNV|1|A|G|443
7UNV|1|A|A|444
7UNV|1|A|A|445
7UNV|1|A|C|446
7UNV|1|A|C|447
7UNV|1|A|A|448
7UNV|1|A|G|449
7UNV|1|A|U|450
7UNV|1|A|A|451
7UNV|1|A|C|452
*
7UNV|1|A|G|459
7UNV|1|A|G|460
7UNV|1|A|A|461
7UNV|1|A|A|462
7UNV|1|A|A|463
7UNV|1|A|G|464
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain E
- 50S ribosomal protein L4
- Chain S
- 50S ribosomal protein L20
- Chain V
- 50S ribosomal protein L23
Coloring options: