J3_7UNV_036

3D structure

PDB id

7UNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7UNV|1|a|C|1208

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UNV_036 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1313

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7UNV|1|a|C|984
7UNV|1|a|U|985
7UNV|1|a|U|986
7UNV|1|a|G|987
7UNV|1|a|A|988
7UNV|1|a|C|989
7UNV|1|a|A|990
7UNV|1|a|U|991
*
7UNV|1|a|A|1038
7UNV|1|a|C|1039
7UNV|1|a|A|1040
7UNV|1|a|G|1041
*
7UNV|1|a|C|1204
7UNV|1|a|U|1205
7UNV|1|a|U|1206
7UNV|1|a|A|1207
7UNV|1|a|C|1208
7UNV|1|a|G|1209

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14