J3_7UNW_035
3D structure
- PDB id
- 7UNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GCCUAAC*GGGGAAUAU*AGC
- Length
- 19 nucleotides
- Bulged bases
- 7UNW|1|a|C|48, 7UNW|1|a|A|50, 7UNW|1|a|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UNW_035 not in the Motif Atlas
- Homologous match to J3_5J7L_050
- Geometric discrepancy: 0.0829
- The information below is about J3_5J7L_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46317.4
- Basepair signature
- cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7UNW|1|a|G|46
7UNW|1|a|C|47
7UNW|1|a|C|48
7UNW|1|a|U|49
7UNW|1|a|A|50
7UNW|1|a|A|51
7UNW|1|a|C|52
*
7UNW|1|a|G|353
7UNW|1|a|G|354
7UNW|1|a|G|355
7UNW|1|a|G|356
7UNW|1|a|A|357
7UNW|1|a|A|358
7UNW|1|a|U|359
7UNW|1|a|A|360
7UNW|1|a|U|361
*
7UNW|1|a|A|387
7UNW|1|a|G|388
7UNW|1|a|C|389
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S16
- Chain x
- Translation initiation factor IF-2
Coloring options: