J3_7UVV_023

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

AGGACG*CC*GAAAAGU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVV_023 not in the Motif Atlas

Homologous match to J3_5J7L_069

Geometric discrepancy: 0.1012

The information below is about J3_5J7L_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.2

Basepair signature

cWW-F-cWW-F-tHH-F-tHS-tHS-cWW

Number of instances in this motif group

4

Unit IDs

7UVV|1|A|A|1419
7UVV|1|A|G|1420
7UVV|1|A|G|1421
7UVV|1|A|A|1422
7UVV|1|A|C|1423
7UVV|1|A|G|1424
*
7UVV|1|A|C|1562
7UVV|1|A|C|1563
*
7UVV|1|A|G|1566
7UVV|1|A|A|1567
7UVV|1|A|A|1568
7UVV|1|A|A|1569
7UVV|1|A|A|1570
7UVV|1|A|G|1571
7UVV|1|A|U|1572

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2