J3_7UVW_006
3D structure
- PDB id
- 7UVW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.37 Å
Loop
- Sequence
- CUC*GAG*CAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 7UVW|1|A|A|2330, 7UVW|1|A|A|2332
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UVW_006 not in the Motif Atlas
- Homologous match to J3_5J7L_045
- Geometric discrepancy: 0.2226
- The information below is about J3_5J7L_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_61124.2
- Basepair signature
- cWW-tWH-tWW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7UVW|1|A|C|2291
7UVW|1|A|U|2292
7UVW|1|A|C|2293
*
7UVW|1|A|G|2317
7UVW|1|A|A|2318
7UVW|1|A|G|2319
*
7UVW|1|A|C|2328
7UVW|1|A|A|2329
7UVW|1|A|A|2330
7UVW|1|A|A|2331
7UVW|1|A|A|2332
7UVW|1|A|G|2333
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S ribosomal protein L5
- Chain N
- 50S ribosomal protein L18
- Chain V
- 50S ribosomal protein L27
Coloring options: