J3_7UVW_034

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7UVW|1|a|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVW_034 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1185

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7UVW|1|a|C|987
7UVW|1|a|U|988
7UVW|1|a|U|989
7UVW|1|a|G|990
7UVW|1|a|A|991
7UVW|1|a|C|992
7UVW|1|a|A|993
7UVW|1|a|U|994
*
7UVW|1|a|A|1041
7UVW|1|a|C|1042
7UVW|1|a|A|1043
7UVW|1|a|G|1044
*
7UVW|1|a|C|1207
7UVW|1|a|U|1208
7UVW|1|a|U|1209
7UVW|1|a|A|1210
7UVW|1|a|C|1211
7UVW|1|a|G|1212

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14