J3_7UVZ_016
3D structure
- PDB id
- 7UVZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CAAUG*CGUAGUCC*GUCG
- Length
- 17 nucleotides
- Bulged bases
- 7UVZ|1|a|U|1237, 7UVZ|1|a|C|1299
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UVZ_016 not in the Motif Atlas
- Homologous match to J3_4LFB_009
- Geometric discrepancy: 0.1326
- The information below is about J3_4LFB_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_03192.1
- Basepair signature
- cWW-cSS-tHW-F-F-F-cWW-cWW-cSH-cSH-F
- Number of instances in this motif group
- 5
Unit IDs
7UVZ|1|a|C|1234
7UVZ|1|a|A|1235
7UVZ|1|a|A|1236
7UVZ|1|a|U|1237
7UVZ|1|a|G|1238
*
7UVZ|1|a|C|1293
7UVZ|1|a|G|1294
7UVZ|1|a|U|1295
7UVZ|1|a|A|1296
7UVZ|1|a|G|1297
7UVZ|1|a|U|1298
7UVZ|1|a|C|1299
7UVZ|1|a|C|1300
*
7UVZ|1|a|G|1331
7UVZ|1|a|U|1332
7UVZ|1|a|C|1333
7UVZ|1|a|G|1334
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain m
- 30S ribosomal protein S13
Coloring options: