J3_7UVZ_023
3D structure
- PDB id
- 7UVZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- AGGACG*CC*GAAAAGU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UVZ_023 not in the Motif Atlas
- Homologous match to J3_5J7L_069
- Geometric discrepancy: 0.0812
- The information below is about J3_5J7L_069
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34864.2
- Basepair signature
- cWW-F-cWW-F-tHH-F-tHS-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UVZ|1|A|A|1419
7UVZ|1|A|G|1420
7UVZ|1|A|G|1421
7UVZ|1|A|A|1422
7UVZ|1|A|C|1423
7UVZ|1|A|G|1424
*
7UVZ|1|A|C|1562
7UVZ|1|A|C|1563
*
7UVZ|1|A|G|1566
7UVZ|1|A|A|1567
7UVZ|1|A|A|1568
7UVZ|1|A|A|1569
7UVZ|1|A|A|1570
7UVZ|1|A|G|1571
7UVZ|1|A|U|1572
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
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