J3_7UVZ_027
3D structure
- PDB id
- 7UVZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CC*GUUGAU*AAUUG
- Length
- 13 nucleotides
- Bulged bases
- 7UVZ|1|A|U|2829, 7UVZ|1|A|A|2831
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7UVZ_027 not in the Motif Atlas
- Homologous match to J3_4WF9_021
- Geometric discrepancy: 0.1727
- The information below is about J3_4WF9_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7UVZ|1|A|C|2810
7UVZ|1|A|C|2811
*
7UVZ|1|A|G|2827
7UVZ|1|A|U|2828
7UVZ|1|A|U|2829
7UVZ|1|A|G|2830
7UVZ|1|A|A|2831
7UVZ|1|A|U|2832
*
7UVZ|1|A|A|2878
7UVZ|1|A|A|2879
7UVZ|1|A|U|2880
7UVZ|1|A|U|2881
7UVZ|1|A|G|2882
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L17
- Chain Z
- 50S ribosomal protein L32
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