J3_7UVZ_035

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7UVZ|1|a|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7UVZ_035 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1051

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7UVZ|1|a|C|987
7UVZ|1|a|U|988
7UVZ|1|a|U|989
7UVZ|1|a|G|990
7UVZ|1|a|A|991
7UVZ|1|a|C|992
7UVZ|1|a|A|993
7UVZ|1|a|U|994
*
7UVZ|1|a|A|1041
7UVZ|1|a|C|1042
7UVZ|1|a|A|1043
7UVZ|1|a|G|1044
*
7UVZ|1|a|C|1207
7UVZ|1|a|U|1208
7UVZ|1|a|U|1209
7UVZ|1|a|A|1210
7UVZ|1|a|C|1211
7UVZ|1|a|G|1212

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14