J3_7V2P_014
3D structure
- PDB id
- 7V2P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGG*CUAGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- 7V2P|1|A|A|637
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7V2P_014 not in the Motif Atlas
- Homologous match to J3_4LFB_015
- Geometric discrepancy: 0.0766
- The information below is about J3_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.4
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7V2P|1|A|C|570
7V2P|1|A|G|571
7V2P|1|A|G|572
*
7V2P|1|A|C|635
7V2P|1|A|U|636
7V2P|1|A|A|637
7V2P|1|A|G|638
7V2P|1|A|A|639
*
7V2P|1|A|U|735
7V2P|1|A|G|736
7V2P|1|A|A|737
7V2P|1|A|C|738
7V2P|1|A|G|739
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain H
- 30S ribosomal protein S8
- Chain L
- 30S ribosomal protein S12
- Chain O
- 30S ribosomal protein S15
- Chain Q
- 30S ribosomal protein S17
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