J3_7WTU_002
3D structure
- PDB id
- 7WTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGG*UAAGA*UA
- Length
- 10 nucleotides
- Bulged bases
- 7WTU|1|2|G|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7WTU_002 not in the Motif Atlas
- Geometric match to J3_4V88_080
- Geometric discrepancy: 0.1559
- The information below is about J3_4V88_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_56052.3
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
7WTU|1|2|U|682
7WTU|1|2|G|683
7WTU|1|2|G|684
*
7WTU|1|2|U|918
7WTU|1|2|A|919
7WTU|1|2|A|920
7WTU|1|2|G|921
7WTU|1|2|A|922
*
7WTU|1|2|U|1022
7WTU|1|2|A|1023
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain H
- 40S ribosomal protein S7
- Chain L
- 40S ribosomal protein S11
- Chain N
- 40S ribosomal protein S13
- Chain W
- 40S ribosomal protein S15a
- Chain X
- 40S ribosomal protein S23
- Chain b
- 40S ribosomal protein S27
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