J3_7WTV_005

3D structure

PDB id

7WTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

7WTV|1|2|C|1138, 7WTV|1|2|A|1150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTV|1|2|C|1094
7WTV|1|2|C|1095
7WTV|1|2|G|1096
*
7WTV|1|2|U|1136
7WTV|1|2|U|1137
7WTV|1|2|C|1138
7WTV|1|2|C|1139
7WTV|1|2|G|1140
*
7WTV|1|2|C|1147
7WTV|1|2|A|1148
7WTV|1|2|A|1149
7WTV|1|2|A|1150
7WTV|1|2|G|1151

Current chains

Chain 2

18S rRNA

Nearby chains

Chain A

40S ribosomal protein SA

Chain C

40S ribosomal protein S2

Chain V

40S ribosomal protein S21

Chain W

40S ribosomal protein S15a

Chain b

40S ribosomal protein S27